Only f4-statistics having absolute Z-scores f4-statistic classes or ascertainment schemes affected by bias are shown in the rightmost column and in the bottom row, respectively. For each f4-statistic class, total number of distinct statistics and the number of statistics having absolute Z-scores f4-statistic classes is shown above the table in an abbreviated way: AFR, African populations; AMRSIB, Native American and Siberian populations; ARCH, archaic human individuals (Neanderthals and Denisovans); chimp, chimpanzee; EAS, East Asian populations; EUR, European populations; ME, Mediterranean and Middle Eastern populations; PAP, Papuan and Australian populations. The SNP counts correspond to sites polymorphic in larger collections of groups f...
Performance of ascertainment schemes on simulated data (those shown in Fig 3) explored across three ...
1) residual standard deviation (residual SE) of linear trends and 2) squared Pearson correlation coe...
The following abbreviations are used: AFR, African populations; ARCH, archaic human individuals (Nea...
Only f4-statistics having absolute Z-scores f4-statistic classes or ascertainment schemes affected b...
Results for ascertainment on variants common in Africans (either those having no detectable West Eur...
The f4-statistic classes were selected to represent severe ascertainment bias (leftmost panels), mod...
We also applied the binary classifier to determine if an ascertainment produces unbiased or biased r...
We also applied the binary classifier to determine if an ascertainment scheme produces unbiased or b...
We also applied the binary classifier to determine if an ascertainment scheme produces unbiased or b...
We also applied the binary classifier to determine if an ascertainment produces unbiased or biased r...
Violin plots illustrating the effects of 10 ascertainment schemes on Z-scores of 14 f4-statistic cla...
The class labels and numbers of statistics plotted are shown in the top row of each panel (a, b, and...
Scatterplots illustrating the effects of 10 ascertainment schemes on Z-scores (a) or f4-statistics (...
(a) Influence of ascertainment on FST across all population pairs on data simulated with or without ...
Five thousand best-fitting graphs (according to log-likelihood scores on all sites) of 32,745 possib...
Performance of ascertainment schemes on simulated data (those shown in Fig 3) explored across three ...
1) residual standard deviation (residual SE) of linear trends and 2) squared Pearson correlation coe...
The following abbreviations are used: AFR, African populations; ARCH, archaic human individuals (Nea...
Only f4-statistics having absolute Z-scores f4-statistic classes or ascertainment schemes affected b...
Results for ascertainment on variants common in Africans (either those having no detectable West Eur...
The f4-statistic classes were selected to represent severe ascertainment bias (leftmost panels), mod...
We also applied the binary classifier to determine if an ascertainment produces unbiased or biased r...
We also applied the binary classifier to determine if an ascertainment scheme produces unbiased or b...
We also applied the binary classifier to determine if an ascertainment scheme produces unbiased or b...
We also applied the binary classifier to determine if an ascertainment produces unbiased or biased r...
Violin plots illustrating the effects of 10 ascertainment schemes on Z-scores of 14 f4-statistic cla...
The class labels and numbers of statistics plotted are shown in the top row of each panel (a, b, and...
Scatterplots illustrating the effects of 10 ascertainment schemes on Z-scores (a) or f4-statistics (...
(a) Influence of ascertainment on FST across all population pairs on data simulated with or without ...
Five thousand best-fitting graphs (according to log-likelihood scores on all sites) of 32,745 possib...
Performance of ascertainment schemes on simulated data (those shown in Fig 3) explored across three ...
1) residual standard deviation (residual SE) of linear trends and 2) squared Pearson correlation coe...
The following abbreviations are used: AFR, African populations; ARCH, archaic human individuals (Nea...